PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH81612.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 105aa    MW: 12225.2 Da    PI: 11.3882
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH81612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.34.5e-1632903998
                EETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
          B3 39 edesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98
                +d++g +W +k+i+r++++r++lt +GW+ Fv  ++L +gD++vF    r +++el+v+v+r
  MCH81612.1 32 RDLHGYEWCFKHIFRGQPRRHLLTtTGWSTFVTYKRLVAGDTFVFL---RvENGELRVGVRR 90
                799*****************777659********************...4489999****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MVASLFPGNM PQNAFLLWIC HNQHQLKNWL PRDLHGYEWC FKHIFRGQPR RHLLTTTGWS  60
TFVTYKRLVA GDTFVFLRVE NGELRVGVRR LARPSSSMPL SVLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61830.18e-34ARF family protein