PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH82186.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 242aa    MW: 26759.8 Da    PI: 8.3339
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH82186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.92.9e-32147203158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep++VNaKQy++Il+RRq+Rak+e+ekk+ +++rkpylheSRh hAl+R+Rg+gGrF
  MCH82186.1 147 EEPVFVNAKQYHGILRRRQSRAKAESEKKV-TRNRKPYLHESRHLHALKRARGCGGRF 203
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
GGIIATNRQA EPRGCQTVGG ELRQTGEQSH TVARWQDDVV MWGHGRSGET SCGGCALRTR  60
HFAAIEHGSA PPCDKALWHC CTQCTGASCH LDVPPAYPYP DPYYRSVFAP YDAQPYPLQP  120
YGGHPMANLQ LMGIQHPGVP LPTDAVEEPV FVNAKQYHGI LRRRQSRAKA ESEKKVTRNR  180
KPYLHESRHL HALKRARGCG GRFLNSKKDE NQQDEVGSAD NSHSNINLNS DRNDLAPSDK  240
NS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-50NF-YA family protein