PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH82552.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 212aa    MW: 23377.8 Da    PI: 4.5948
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH82552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-171867255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++GVr +k +g++v+eIr p++   r+r++lg++++ae+Aa+a +aa+ +l+g
  MCH82552.1 18 LFRGVRKRK-WGKYVSEIRLPNS---RQRIWLGSYDSAEKAARAFDAAMFCLRG 67
                69****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVKTNVEKPA TERSDASLFR GVRKRKWGKY VSEIRLPNSR QRIWLGSYDS AEKAARAFDA  60
AMFCLRGSGA KFNFPGDPPN IAGGRSMTPS QIQEAASRFA NSDIHNEKPG RPDNVKVESE  120
SSSEGTVMLP MESPSPALSD ATVQTDFDFK QNGLFSDLVG VNGSGYSGPD YNVFPGFDDF  180
GGDFYVPDLP SYDYGEENMD GLIIHDSFLW NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.16e-50ERF family protein