PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH82635.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 342aa    MW: 37421.4 Da    PI: 4.0968
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH82635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.37.4e-132061245
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     g+WT +E +ll++a +++  + W+ Ia+++g +++  qc++++ 
       MCH82635.1 20 GKWTDQETLLLLEALELYKEN-WNEIAEHVG-TKSKAQCILHFV 61
                     89*****************88.*********.**********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MSSLDFILME PAEAAGVSSG KWTDQETLLL LEALELYKEN WNEIAEHVGT KSKAQCILHF  60
VQMPIMDAFV DCDDDVDAGS KETADPAATN NNLSIDEDKD KKDEDKDKKD AGKDKKDEDK  120
DKKDKDXXXX XXXXXXXXXX XXXXXETSQA EDVKVKDNQE ETPKLPDGSD EKTSEETSKL  180
EDDIKAKLGE EVSNECVLNA LKEAFAAVGY SPEPEGPSSF AEVGNPVMAL AAFLSQLVGS  240
DVAVASAHNY IKSLSGNTPG TEIASRCCFL LEDPPDDKKE TTTSERDFKR VGDQTDKSVQ  300
QDTAMLDDKD LENDPQKTKI AGDASEDKLH LASTDGGISE KS