PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH82693.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

MYB

Protein Properties

Length: 176aa MW: 20530.4 Da PI: 8.4733

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH82693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.1e-19	79	124	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEde l+++v+++G ++W+ Ia+ ++ gR +kqc++rw++ l MCH82693.1 79 RSWTKEEDETLIELVRKYGFKRWSFIAKFIP-GRIGKQCRERWHNNL 124 68***************************.**********975 PP
2	Myb_DNA-binding	34.2	5.9e-11	130	162	1	35
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35 +++WT+eE+ +l+++++ +G++ W+ Iar ++ gR MCH82693.1 130 KDAWTEEEESILAHYHQIYGSK-WAEIARILP-GR 162 689*****************.*******.98 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MKNELNGSPH PDSLHLCLSS PNCNNHTCFL ESSTSVTGKI TLGYSSMMKY SITAYFPGRT 60 DIECFHRWQK VSDFDLGKRS WTKEEDETLI ELVRKYGFKR WSFIAKFIPG RIGKQCRERW 120 HNNLDPAIKK DAWTEEEESI LAHYHQIYGS KWAEIARILP GRYLFDTVMQ AFRSAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	2e-50	MYB family protein