PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH82846.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 145aa    MW: 16338.5 Da    PI: 8.3851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH82846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32.1e-1179124655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri  ++ +L++l+P+     +k  s +++L +Av++Ik Lq
  MCH82846.1  79 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 124
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
SNSIVFSSSA PQTNNSNKRS SRTDNEDPDL LLHCLTALET QYSLPQTSLE MDKLMHNIPQ  60
DSVPCKIRAK RGCATHPRSI AERERRTRIS GKLKKLQDLV PNMDKQTSYS DMLDLAVQHI  120
KGLQTQVQKL HEDLENCTCG CKQST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.12e-57bHLH family protein