PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH82909.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

FAR1

Protein Properties

Length: 389aa MW: 45380.6 Da PI: 8.9343

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH82909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.9	4.5e-15	41	126	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y +YA+ +GF rk +sk+ ++g t+ Cs+ k +++k+ ++++ t+t+Cka+l+ ++ +g+ ++++ leHnHel+p MCH82909.1 41 DYYMNYARCMGFGFRKISSKNG-DDG-KRYFTLGCSRARKYVSNSKN---LLKPNPITKTQCKARLNACMSLEGTVTISSVILEHNHELSP 126 59************998887.444.68899****9999988...999**************9***************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MTRKQVKEVK KNDDILDKKL PYDGENPRAG MTFSSEDEAT DYYMNYARCM GFGFRKISSK 60 NGDDGKRYFT LGCSRARKYV SNSKNLLKPN PITKTQCKAR LNACMSLEGT VTISSVILEH 120 NHELSPTKAR YFRCNKNLGP YMKRRLELND QAGINVSRNF RSLVVEADGY ENLSFGERDC 180 RNYIDKVRRL RLGTGDADAI QNYFVRMQKQ NSQFYYVMDL DDESRLQNVF WADARSRAAY 240 EYFGEVITFD TTYLTNKYDM PFAPFVGVNH HGQSILLGCA LLSNEDTETF TWLFKTWLEC 300 MQGRAPNAII TDQDRAMKNS IEVVFPKARH RWCLWHIMKK VPEKLGRHSD YESIKTLLHD 360 IVYDSWSKSD FVEKWEKMVG YYDFKIMNG

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MTRKQVKEVK KNDDILDKKL PYDGENPRAG MTFSSEDEAT DYYMNYARCM GFGFRKISSK  60
NGDDGKRYFT LGCSRARKYV SNSKNLLKPN PITKTQCKAR LNACMSLEGT VTISSVILEH  120
NHELSPTKAR YFRCNKNLGP YMKRRLELND QAGINVSRNF RSLVVEADGY ENLSFGERDC  180
RNYIDKVRRL RLGTGDADAI QNYFVRMQKQ NSQFYYVMDL DDESRLQNVF WADARSRAAY  240
EYFGEVITFD TTYLTNKYDM PFAPFVGVNH HGQSILLGCA LLSNEDTETF TWLFKTWLEC  300
MQGRAPNAII TDQDRAMKNS IEVVFPKARH RWCLWHIMKK VPEKLGRHSD YESIKTLLHD  360
IVYDSWSKSD FVEKWEKMVG YYDFKIMNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	4e-76	FAR1 family protein