PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH83405.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 137aa    MW: 15340.6 Da    PI: 10.919
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH83405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.18.3e-13555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G+g W+tI           +R+  ++k++w++
       MCH83405.1  5 KQKWTAEEEAALKAGVVKHGSGKWRTILTDPEfssilRTRSNVDLKDKWRN 55
                     79************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV VKHGSGKWRT ILTDPEFSSI LRTRSNVDLK DKWRNINVTA  60
VWGSRQKAKL ALKKNLALPA PKTNNNQLTV SKVVQREDIL DVKPLAVSSG TLHSPNSKEQ  120
VSRFKNFQLN ISAIYYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.15e-37MYB_related family protein