PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH83586.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HB-other
Protein Properties Length: 228aa    MW: 25517.3 Da    PI: 8.3288
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH83586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox201.2e-06157157
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                +r+R  ++++ ++ ++++F  +  +s++e +e+++  g+t +qV+ +F  +R + +k
  MCH83586.1  1 KRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDYFTSQRSRVRK 57
                799**************************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
KRPRDLLNPK AVNYMQSVFS IKDAISKKES REISALFGVT VTQVRDYFTS QRSRVRKQVQ  60
LSKERALKSN SCAESLDVQI NSDPVRSMNP APLNSVGATN VEEASYSAQE AALSDLDDSD  120
KQFVENIFGL MQKEETFCGQ EKLLEWILTI HNFSVLLWFL TGGGAMTLAN WLSKAAVEEQ  180
TSVLLLVLKV LCHLPLHKAH PAHISALLQS VNRLRFYRTS DCTLMASV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02560.24e-73HB-other family protein