PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH83761.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

FAR1

Protein Properties

Length: 547aa MW: 62639.3 Da PI: 6.8782

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH83761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.7	1.9e-13	58	130	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fY+eYAk+ GFs + + + + +g+ + r+fvCs+eg +++ +++ C a+l+++++ ++kw+vtk++ H+H+ MCH83761.1 58 FYSEYAKRSGFSSKAGLHGQFNADGTNMFREFVCSMEGLKRRMTES--------------CGAMLRIEQKGQNKWVVTKFVRGHSHA 130 *************************************9997766..............************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MDVHVITIGE GSGAMENNGH VELGEVNDVG NSGSHAEDVV SEPYLGMVFD SEDSAKTFYS 60 EYAKRSGFSS KAGLHGQFNA DGTNMFREFV CSMEGLKRRM TESCGAMLRI EQKGQNKWVV 120 TKFVRGHSHA TAVPDKVEKL RPQKHFSSVG RTMPETYKGV GLVPTGVMYI SIDGHHVSSE 180 NSHKIRNFPA VAGGKTSHPV KNTTSTTYTV RKPIQKKTLG RDAPNLLEYF KKVQAENPGF 240 FYAIQLDEDN RMSNVFWADA RSRTAYSHFG DAVTLDTTHR ANQYNVPYAP FTGINHHGQM 300 ILFGCALLFD DSEASFSWLF KTFLAAMNDH HPISITTDQD RSIQKAVSKV FPQARHCINK 360 RYVLREGHEK LGHVCRMHPY FHYELYNCIN LTETIEEFDF SWNSIIDKYE LRGHDWLRSL 420 YSARDQWVPA YFRDSFFAVL SPNQGFEXXX XXXXXXRHTT LPMFFRQYEL ALERWFEKEI 480 ESDFETISTT PVLKTPSPME NQVAKLYTQK IFLKFQEELV ETFAYTANRI EEDGENSIFR 540 AFFVGMF

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MDVHVITIGE GSGAMENNGH VELGEVNDVG NSGSHAEDVV SEPYLGMVFD SEDSAKTFYS  60
EYAKRSGFSS KAGLHGQFNA DGTNMFREFV CSMEGLKRRM TESCGAMLRI EQKGQNKWVV  120
TKFVRGHSHA TAVPDKVEKL RPQKHFSSVG RTMPETYKGV GLVPTGVMYI SIDGHHVSSE  180
NSHKIRNFPA VAGGKTSHPV KNTTSTTYTV RKPIQKKTLG RDAPNLLEYF KKVQAENPGF  240
FYAIQLDEDN RMSNVFWADA RSRTAYSHFG DAVTLDTTHR ANQYNVPYAP FTGINHHGQM  300
ILFGCALLFD DSEASFSWLF KTFLAAMNDH HPISITTDQD RSIQKAVSKV FPQARHCINK  360
RYVLREGHEK LGHVCRMHPY FHYELYNCIN LTETIEEFDF SWNSIIDKYE LRGHDWLRSL  420
YSARDQWVPA YFRDSFFAVL SPNQGFEXXX XXXXXXRHTT LPMFFRQYEL ALERWFEKEI  480
ESDFETISTT PVLKTPSPME NQVAKLYTQK IFLKFQEELV ETFAYTANRI EEDGENSIFR  540
AFFVGMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein