PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH84176.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 126aa    MW: 14518.5 Da    PI: 9.8735
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH84176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.43.8e-095597347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT +E+e +  a +q G++ +++I ++++  +   q++++++ +
       MCH84176.1 55 AWTRQEEESFFTALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 97
                     6*****************99.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MQTEAEILTD LSTQLHSETI VSVQNEDPGV STSLANAVIL PQQPAPKKPT RQWAAWTRQE  60
EESFFTALRQ VGKNFEKITS RVQSKNKDQV RHYYYRLVRR MNKLLGPELC LDAKNSKDTN  120
AAMLRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.16e-52MYB_related family protein