PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH84260.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ZF-HD
Protein Properties Length: 260aa    MW: 28608.5 Da    PI: 7.0796
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH84260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer89.92.4e-2852109260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++vr++eC+kNhA+s GghavDGC+Ef+++ gee+t +a+ CaAC+CHRnFHR+e + e
   MCH84260.1  52 STVRHRECQKNHAVSFGGHAVDGCCEFIAA-GEENTLEAVICAACNCHRNFHRKEIDGE 109
                  5799*************************9.9999*******************98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEFDEHEEQE EEMEISETQT PVPATYDSRS KNVAGVDGRK GNGNGNSSRF SSTVRHRECQ  60
KNHAVSFGGH AVDGCCEFIA AGEENTLEAV ICAACNCHRN FHRKEIDGET VSSCQRPQPP  120
PPPQPYHHQF SPYYHRVPPS TAGYLHHHLA TPVAHHRPLV LPAAASGGGL SREEDDMSNP  180
SSSGGGGGGN GGGGGSRKRF RTKFTQEQRD KLLAFAEEHG WRIQKQDEAA IEQFCAENCV  240
KRNVLKVWMH NNKNTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-57ZF-HD family protein