PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH84329.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB
Protein Properties Length: 314aa    MW: 35858.1 Da    PI: 7.072
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH84329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.7e-083479346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+eE +l+ +a + + ++   +W ++a++++ g+t  +++  ++ 
       MCH84329.1 34 KWTQEENKLFENALAYYDKDtpdRWIRVAEMIP-GKTVGDVIKQYRE 79
                     8********************************.******9999986 PP
2Myb_DNA-binding46.11.2e-14141185347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       MCH84329.1 141 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 185
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MMLSRTMNRG IEVLSPASYI QNSNWLFEEN KGSKWTQEEN KLFENALAYY DKDTPDRWIR  60
VAEMIPGKTV GDVIKQYREL EEDVCVIEAG LIPVPGYTTS SFTLDWDNNQ GFDEFKQFCS  120
VGEKRGGSTR PSEQERKKGV PWTEEEHRQF LLGLKKYGKG DWRNISRNFV TTRTPTQVAS  180
HAQKYFIRQV SGGKDKRRSS IHDITVVNLQ ETKSPSSDSN NPSSPDHLVN VANQPQNHNL  240
SSMVKQEYDL KLPDEEGMPF VFNSTKGNMF VAPLCGISSH ESKSPGHNIL RGTHHGFQFS  300
PFDTIFQMQS MQHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-119MYB family protein