PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH84445.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 190aa    MW: 21393.5 Da    PI: 4.5866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH84445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-11138181755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ErrRR r+++++  Lr+l+P+      +K++Ka+i   Av Y+++Lq
  MCH84445.1 138 ISERRRRGRMKDKLYALRSLVPNI-----TKMDKASIIGDAVSYVHDLQ 181
                 78*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDEHQNSLVY TNNFELHDFI DDPNFDQFID LIRGENEDAI CNFGSDLIND CFVDNNNHQL  60
LLNPPNPLIF NHNSNNYSNI VNVYDPSSST IGSFSCYDGE VKGEGENDGD DSSATTITTT  120
AIDDAKPRAK NDRSKTLISE RRRRGRMKDK LYALRSLVPN ITKMDKASII GDAVSYVHDL  180
QAQSRKLKAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-40bHLH family protein