PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH84559.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 229aa    MW: 26533 Da    PI: 7.3588
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH84559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.51.7e-2665153290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fY+eYA++vGF +r+ + ++s+r+g+i  r++ C+keg+  + + k    r+tra++r gCka++++k +k++kw++tk++++HnH+l+
  MCH84559.1  65 FYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKLGPVRKTRASSREGCKAMIHIKYDKSEKWVITKFVKDHNHPLV 153
                 9***************************************9999999****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MESRLVDGSD RTEVSGDADF VEPNDGCRLQ ENYSGRELGS SHHDHAIQEP YEGMEFASED  60
AAKIFYDEYA RHVGFVMRVM SCRRSERDGR ILARRLGCNK EGHCVSIRGK LGPVRKTRAS  120
SREGCKAMIH IKYDKSEKWV ITKFVKDHNH PLVVSPREAR QTMDEKDKKI QDLTAELRIK  180
KRLCVTYQEQ LTSFMKIVEE HSDKLSARIH HILDNLKEYE SIEELLHQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-99FAR1 family protein