PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH84968.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 150aa    MW: 17337.7 Da    PI: 4.5594
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH84968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.20.00122440521
                TTTEEESSHHHHHHHHH CS
     zf-C2H2  5 dCgksFsrksnLkrHir 21
                 C+ sF+r s+L+ H+ 
  MCH84968.1 24 SCHLSFPRLSELEIHLC 40
                5**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MCDELRGWRR MKDDVNDDDN SSQSCHLSFP RLSELEIHLC SRLTHMPTFP KLDADLNFTF  60
ARVEALEATL NMDIEICFKD NFNYLPVLRD IRFSNCNDIE TLPDWICNLS SLQSITLLES  120
DDAIYKKLAN VDGNVAAIQL IWFSKRCGQK