PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85027.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 251aa    MW: 29393.9 Da    PI: 6.8592
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.61.6e-2675165190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fYn+Y++++GF+vr++++++s+ n+e++ ++fvCskeg+r+++  +++++    + + +r gC+a++++++++ gkw+vtk+e+eH+H+l+
  MCH85027.1  75 EFYNAYGRRIGFTVRVHHNRRSRINKEVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPPSREGCQAMVRMTLQDGGKWVVTKFEKEHTHKLM 165
                 6******************************************99883333.2348899*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MMDHQSGQGF NSYGSDLNVI AETSEKHDKV DVDISNNLEL CAGEDERFVE QPVADSDTIE  60
PFIGMEFNSR EEAREFYNAY GRRIGFTVRV HHNRRSRINK EVIGQDFVCS KEGFRAKKYV  120
HRKDRVLPPP PPSREGCQAM VRMTLQDGGK WVVTKFEKEH THKLMSPSEV PWRRSEKHLI  180
SEDEKDRRIR ALSLELYNER QKYKRRCAAY EEQINMILND VERHTEHISK KVADVVRNIR  240
EIEEEKSESN G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-43FAR1 family protein