PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85141.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 222aa    MW: 25161 Da    PI: 5.2572
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.7e-1160103654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr ++Pk +      K++  +iL  +++Y+k+L
  MCH85141.1  60 LMAERRRRKRLNDRLSMLRAIVPKiS------KMDRTAILGDTIDYMKEL 103
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MGEEEDQSLL GEELQNLELQ TTCKMEPTQS PEMPIVFNTG TSLERKNRAK KLQGQPSKNL  60
MAERRRRKRL NDRLSMLRAI VPKISKMDRT AILGDTIDYM KELLEKINNL QQEIELDSNM  120
TSIVKDVKPN EILIRNSPKF EVERGADTRV EICCAGKPGL LLSTVNTLEA LGLEIQQCVI  180
SCFNDFTMQA SCSEELERRT MLSSEDIKQA LFRSAGYGGR CL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16370ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-84bHLH family protein