PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85377.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 240aa    MW: 26838.6 Da    PI: 8.8097
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.21.4e-08221626
                -SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  6 CrffartGtCkyGdrCkFaHg 26
                C+++++ G C yG+rC++ H+
  MCH85377.1  2 CSYYQK-GSCAYGSRCRYKHV 21
                ******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
VCSYYQKGSC AYGSRCRYKH VRASQASSSA SMVSDSAKVA SNWVPKVTKA PAPDKRGVRS  60
LQRKHQDSSD VGESSTASAR PHDIFCTFAA ANCPLGDGCS RVHGNQCLYC RKYCLHPTDK  120
KEKESHLRTC DKKEKYLLAL KNSEEIECNV CLERVLSKPK PSECKFGLLP ECDHAFCLSC  180
IRNWRNSAPT SGIEISSNSN TVRTCPVCRK LSYFVIPSGI WFTTKEEKQE IIDNYKANCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.12e-68C3H family protein