PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85378.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 214aa    MW: 24053.3 Da    PI: 9.0216
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-1290135756
         AP2   7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 r ++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g+
  MCH85378.1  90 R-HHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRGA 135
                 4.777*******988532...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDLSNYIMIL PLYINLLPRG AVIWILIGRS HLLRDRELVS SDNFLGWVGG VFFGGPEHEG  60
CLPDYGIMRK TSIWWDFVPD YGTRRKISIR HHQQGRWQAR IGRVAGNKDL YLGTFATEEE  120
AAEAYDIAAI KFRGANAVTN FEMNRYDVDA IMQSSLPVGS TAKRVKRSLG SEQKASVTSN  180
IQQQNNAEQY AACMINSNKS SNINFSTIPH QLPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.15e-33AP2 family protein