PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85440.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LFY
Protein Properties Length: 120aa    MW: 13615.6 Da    PI: 9.9137
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY247.75.1e-761106281386
     FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLCh 379
                 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdee sn+lrr fkergenvGawrqacykplvaiaarqgwdida+fnahprLsiWYvPtkLrqLCh
  MCH85440.1   1 VTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCH 99 
                 9************************************************************************************************** PP

     FLO_LFY 380 lerskas 386
                 +er+ a+
  MCH85440.1 100 AERNGAA 106
                 ***9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
VTNQVFRYAK KAGASYINKP KMRHYVHCYA LHCLDEEVSN ELRRGFKERG ENVGAWRQAC  60
YKPLVAIAAR QGWDIDAIFN AHPRLSIWYV PTKLRQLCHA ERNGAAASSS VSVGTTHLPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.12e-67LFY family protein