PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85465.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 285aa    MW: 33147.2 Da    PI: 7.2233
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.91.2e-21190284191
        FAR1   1 kfYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                 +fY +Y+k  GF vrks s+ +   +n+ i++++fvC+++g re+++   t+++ ++r  trt+C a+l+v+ +  +++++vt +e+ HnHel+p
  MCH85465.1 190 DFYYRYGKYNGFAVRKSDSRVTgsGDNKVIKMKQFVCNRHGVREKRHLVrTDRKLEHRRLTRTQCGARLRVNYKAeKDRYVVTAFEETHNHELTP 284
                 6****************999887689999***************9987756778889***************9999****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MPWRDSDHHW YDGMPRWGIE EALLESWLIF SERVRREMRE VALVEMERVG LQNGCNNSVK  60
KKKMKMVMKA TSCSWSAVST LSFINISFSR HPNCEIKNRF LCCARVVLRI TMETYDESVD  120
ADSIHSSERD SWDDELDDDG SYSVSSADKS STDGNNDVDE VGGDNKVRFD TITAEEIRCM  180
EFATVSEAYD FYYRYGKYNG FAVRKSDSRV TGSGDNKVIK MKQFVCNRHG VREKRHLVRT  240
DRKLEHRRLT RTQCGARLRV NYKAEKDRYV VTAFEETHNH ELTPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-08FAR1 family protein