PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85467.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 245aa    MW: 27388.4 Da    PI: 6.0313
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.0003296118123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  MCH85467.1  96 FSCNYCQRKFFSSQALGGHQNAH 118
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MQQNIDLEVE AYAEYESDVT SQVASNVSTQ ETSSNISKPI GINLNHPNLD DNDISLDLTL  60
NFKKNELRDS NSIGFSISST SESSNEPASA TIQRVFSCNY CQRKFFSSQA LGGHQNAHKR  120
ERTLAKRAMR MGIFSDRYNA SLASLPLHGS FRSLGIKAHS SMHYGFSVPT TIRPHNHHEM  180
KNNTKFEQGC VGFPIFLEDE ESELLWPGSF RQASEAGDGQ QNFMLTEMNP CVDKEKSTPD  240
LTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-49C2H2 family protein