PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH85605.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bZIP

Protein Properties

Length: 290aa MW: 33280.8 Da PI: 7.9532

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH85605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32	2.7e-10	4	38	7	41
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 +rr+++NReAAr+sR+RKka++++Le +L + MCH85605.1 4 QRRLAQNREAARKSRLRKKAYVQQLESSRLKLVQL 38 8*************************865555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MQIQRRLAQN REAARKSRLR KKAYVQQLES SRLKLVQLEQ ELERVRQQGM YTGGGLDSNN 60 MCFAGPMNSG IAAFEMEYGH WVDEQNRQIS EMRNALNSHI SDIELRILVD GMMNHYAEIY 120 RMKSAAAKAD VFYVMSGMWK TTAERFFLWI GGFRPSELLK ILGPMIEPLT EQQRLDIDNL 180 RQSCQQAEDA LSQGMEKLRQ TLADSVAAGQ FIEGTYIPQM ATAMEKLEAL VCFVNQADHL 240 RQETLQQMSR ILTIRQSARC LLALGEYFQR LRAXXXXXXX XXXEPALSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10030.1	1e-143	bZIP family protein