PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH86322.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family E2F/DP
Protein Properties Length: 193aa    MW: 21121 Da    PI: 9.8425
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH86322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.58.6e-27111176171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liek+ kn+i wkg
  MCH86322.1 111 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKNIKNRILWKG 176
                 6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MVILCKNVEK TFPAGTITVH CSLSVSGLVM LNYELLIKRK NGMNESQGES QKWSNSPGYT  60
NVTNSPFKTP LSAKEGRTHK SRVSKEGRSC PXTPISNAGS PSPLTPAGSC RYDSSLGLLT  120
KKFINLIKHA EDGILDLNKA AETLEVQKRR IYDITNVLEG IGLIEKNIKN RILWKGIESS  180
TPGNVDGDIN MLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.12e-56E2F/DP family protein