PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH86448.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

CPP

Protein Properties

Length: 286aa MW: 30885.9 Da PI: 7.9928

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH86448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.7	7.2e-16	154	190	4	40
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k+CnCkkskClk+YC+Cf ag +C+++C Ce+C N+ MCH86448.1 154 KSCNCKKSKCLKLYCDCFGAGLFCGDDCACESCGNRV 190 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MNATSSNMKM VPVASSKPPG IGLHLNSIVN AMPPSRASTS GVRLSDGLQG IQSKPSISLH 60 KVESVTRSSV PSNMDGQLFI DTRNESHETD ASVVADSFIS ESPILKESID LYPANTHDKK 120 RISPTEVENT EESNHRSTSK KKKKTSADDA SGPKSCNCKK SKCLKLYCDC FGAGLFCGDD 180 CACESCGNRV EFQETVVETK HHIESRNPQA FAPKIVLCAA DVPPNNMEDV NMTTPASARH 240 KRGCNCKSFA VSANRFLFEN ICHKANVGCS SGCRCDGCMN AFGKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-26	CPP family protein