PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH86483.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 214aa    MW: 24694.1 Da    PI: 9.3968
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH86483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00042104126123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C++C+k F +   L  H++ H
  MCH86483.1 104 FICHYCDKKFFSIRALGGHQNAH 126
                 89********9999999999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSKRISILDD GDRKLEHKMD EKLESRPDKE RKVIPPTSTS NVEDLFAVRF GIRPKSTIKS  60
LEIGEHSPSS QNDAIELLSQ SAANEHLSQN ATDKPLSKQE MRKFICHYCD KKFFSIRALG  120
GHQNAHKRER VSIKMEKQMR EEEIISTLRF ILGHQPYPYP LSIPIHYQGH SNLVSFNETP  180
YRKRRKNPDK AQDCCDAGAV FFSIKSPDLF QDPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.12e-12C2H2 family protein