PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH86747.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

HB-other

Protein Properties

Length: 239aa MW: 27244.8 Da PI: 4.5644

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH86747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.5	2.9e-10	188	232	9	53
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++ +e L ++F++n p ++ + L+k+lgL+ ++V WF+N R+ MCH86747.1 188 HDAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWFKNARY 232 578899*************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MKDVFKEEAA IPDGDDALLN QEEEWPSDDP EDDDYNPERK EDSHDGINTE GNDENASADS 60 SSSGSMWSLN GECSLLDEGI NLEYYSVNGH VDSDESGEIA CGRRQRRAVD YKKLYDEMFG 120 KDALPYEQVS EDEDWGPGKR RRREKESDAV NTLMTLHESE NKHPNKEKKD RIRGDSSGIK 180 RPCFRLPHDA VEKLRQVFAE NELPPKSVKD ALSKELGLDA AKVNKWFKNA RYMALKTRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	168	KRRRREKESDAVNTLMTLHESENKHPNKEK
2	140	169	KRRRREKESDAVNTLMTLHESENKHPNKEK
3	140	145	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29940.2	9e-51	HB-PHD family protein