PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH86797.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

G2-like

Protein Properties

Length: 70aa MW: 7581.63 Da PI: 9.6889

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH86797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	51.6	2e-16	1	29	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk+i+++m+vkgLtl h+kSHLQkYRl MCH86797.1 1 ATPKAIMRTMNVKGLTLFHLKSHLQKYRL 29 9***************************8 PP
2	Myb_DNA-binding	30	1.2e-09	2	28	23	48
-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmg.kgRtlkqcksrwqkyl 48 t+k+I+rtm+ kg+tl ++ks++qky+ MCH86797.1 2 TPKAIMRTMNvKGLTLFHLKSHLQKYR 28 79************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 70 aa Download sequence
ATPKAIMRTM NVKGLTLFHL KSHLQKYRLG KQSGKDIGEG CKDGMTGSYL LESPGTDNSS 60 PKLPTSDTNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	2e-18	G2-like family protein