PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH87082.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 113aa    MW: 13241 Da    PI: 8.4702
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH87082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.8e-08244447
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     WT+eE   l d+++++  + +  Ia +++  Rt  ++k+r++++
       MCH87082.1  2 WTKEETNELFDLCERFDLR-FVVIADRFPSSRTVXELKDRYYSV 44
                     *******************.*********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MWTKEETNEL FDLCERFDLR FVVIADRFPS SRTVXELKDR YYSVLRAILL ARAASSGDVA  60
THPVIKDPYN VSQEMERKRA LSMVLSQTRQ QEKRDEEVLI EAKRIAELRM ASK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47210.12e-48MYB_related family protein