PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH87167.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family CPP
Protein Properties Length: 157aa    MW: 16921 Da    PI: 7.4375
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH87167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR45.91.1e-141451239
         TCR  2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
                +k+ CnC+ks C++kYC Cf++g+ Cs  CkC++CkN 
  MCH87167.1 14 QKRVCNCNKSGCQRKYCACFKDGVGCSPICKCQGCKNI 51
                5789*********************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
EDPNITLASK PQLQKRVCNC NKSGCQRKYC ACFKDGVGCS PICKCQGCKN IHGRKNSTAE  60
TKSELEETKT LQISRTLPPL PYSSMGKPPQ ISCSDLFGSQ NQELVESNAT GSITIPDDVN  120
CINTSSIGKW ICISNPECEN GVESSPTRSG GQNSTLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.13e-13CPP family protein