PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH87302.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 222aa    MW: 24928.8 Da    PI: 5.916
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH87302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.5e-111481881055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  MCH87302.1 148 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVNYVKFLQ 188
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEENVKVNED AIGSDDHILE KNDYTTQIME HVDFPNKNEL QIQLKRKLDV IGVEENINKK  60
SENPKKKPRV SKDGQGCMKN ARSKKNLQKV ASNEEIDNGE SNGNSSSSNI YEDDNGSQEN  120
SGGTTLNSNG KTRASRGSAT DPQSLYARKR RERINERLRI LQNLVPNGTK VDISTMLEEA  180
VNYVKFLQVQ IKLLSSDDMW MYAPLAYNGL DIGLNLNNSL PL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.11e-43bHLH family protein