PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH87450.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 137aa    MW: 15529 Da    PI: 4.7029
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH87450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26030.78.6e-1024260100
      DUF260  60 slvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                 slvyeAear+rdPv+G +  +++l++ql++++++++ +k++
  MCH87450.1   2 SLVYEAEARVRDPVNGYLDYVHNLEHQLMEVEQKINNVKSH 42 
                 9**********************************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
DSLVYEAEAR VRDPVNGYLD YVHNLEHQLM EVEQKINNVK SHLTKYLSPE VIQFVMNNPS  60
CFGFEPNNNQ NSTAQLTAAQ HQQLELLRQT IYRSGTRXNP VDGDGFGQHM DANVLDLDGA  120
TLFRAIIIPH DMINGNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.12e-09LBD family protein