PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH88086.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 174aa    MW: 19002.8 Da    PI: 8.5052
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH88086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.6e-112266554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                h+++Er RR+ri +++  L+el+P+ +      K +Ka++L + v+Y+k L
  MCH88086.1 22 HSIAERLRRERIAERMKALQELVPSiN------KTDKAAMLDEIVDYVKFL 66
                99***********************77......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MPQAPGIRPR VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPSINKT DKAAMLDEIV  60
DYVKFLRLQV KVLSMSRLGG AGAVAQLVAD VPVSAVEGDD IEGGANQQAW AKWSNDGTEQ  120
QVAKLMEEDV GAAMQLLQSK ALCIMPISLA SAIFRMPQSD TSTIIKPESN NSHT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-68bHLH family protein