PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH88099.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 123aa    MW: 14462.8 Da    PI: 7.3015
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH88099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.61.1e-112352130
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                     +g+WT+eEd ll+++v+ +G g+W+++ar 
       MCH88099.1 23 KGPWTAEEDRLLIEYVRVHGEGRWNSVARL 52
                     79**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MYYRGVMAGQ IGHGIMEEEL WRKGPWTAEE DRLLIEYVRV HGEGRWNSVA RLAALKYVIT  60
FNCFIFSNFS LCRICQCCVM CFVYGGLNDH INSESLKFIY YSRIEKEWKE LQIEMGELSK  120
ARS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13480.11e-20MYB family protein