PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH88182.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 126aa    MW: 14153.2 Da    PI: 6.8843
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH88182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.98.2e-0994119127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 yk + C+++   G C +Gd C+FaHg+
  MCH88182.1  94 YKSRMCHHWEN-GNCLRGDACRFAHGE 119
                 899********.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MFVLYVFSEV VPGGIMLGRE FSNAYIDQAQ QQAERCRLCR GNAFPGITFT MHIPEDLCVK  60
CLLLIAKQTS AFYSENNYLA GRVADLEQVL QVKYKSRMCH HWENGNCLRG DACRFAHGEA  120
ELAGNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.15e-07C3H family protein