PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH88419.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 253aa    MW: 28636.9 Da    PI: 5.2629
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH88419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.91.7e-2888175291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 fYn+YA evGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a+++++k ++gkw++tk+++eH+H+l+p
  MCH88419.1  88 FYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNP 175
                 ******************************************9988..9**************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
ELGIDDSVNG DAVRDAVMVE VGSIPDENIE EESSAEPTYK QDQDDNVTQD SSGGALTIPS  60
AVPTLPDASA DEPYVGQEFE SEAAAHAFYN AYAAEVGFII RVSKLSRSRR DGTAIGRALV  120
CNKEGYRMPD KREKIVRQRA ETRVGCRAMI MMRKINSGKW VITKFVKEHT HPLNPGSNRR  180
DCMFEQYPSQ NEHDKIRELS QQLAIEKKRS ATYKRQLEVI FDYIEEHNVT LSHKIQHIVD  240
SVKQMEPKEE DNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-95FAR1 family protein