PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH88600.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

WOX

Protein Properties

Length: 208aa MW: 22951.7 Da PI: 8.3312

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH88600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52.1	1.1e-16	26	86	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p +ee ++ k l ++ +++V++WFqNrR + ++ MCH88600.1 26 RSRWTPKPEQILILESIFNSgMVNPPKEETIKIRKLLekfgNVGDANVFYWFQNRRSRSRR 86 89***************99***********************************997 PP
2	Wus_type_Homeobox	106.4	1.8e-34	25	88	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+kee+ +i++ Le++G+++d+NVfyWFQNr++R+r++q MCH88600.1 25 VRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQ 88 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MEDKMQHNPP NNTPTQHGSE KTEPVRSRWT PKPEQILILE SIFNSGMVNP PKEETIKIRK 60 LLEKFGNVGD ANVFYWFQNR RSRSRRRQRQ MQQATLDQQK NQMLMMQQPQ QVVVNDGASA 120 TASAMNNSCD MVQTNYPIMG GFGGGSSCLN DSSGSSSSSS CGGVLSGQQG MDGFFSVSSQ 180 MGFLGIDQTL TPSSLLCPPF SSNLNYHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	7e-34	WOX family protein