PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH88665.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 188aa    MW: 20362.7 Da    PI: 6.5913
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH88665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.8e-1863113155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a+++a+++++g
  MCH88665.1  63 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIGAAFAYDEAARAMYG 113
                 56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MLAKACEKGD GSKSLGKILA RWKEYNAQLE ACNDADKPVR KVAAKGSKKG CMKGKGGPEN  60
SRCNYRGVRQ RTWGKWVAEI REPNRGSRLW LGTFPTAIGA AFAYDEAARA MYGSCARLNF  120
PNVSVPRFSE ESSNDSPDAN TESMTVLTNT ESMIIPNNSG IGGDDDTDME PVSLSVSVKQ  180
ENEEGESG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.29e-42ERF family protein