PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH88888.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

HB-other

Protein Properties

Length: 136aa MW: 15355 Da PI: 4.5986

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH88888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	15.6	2.9e-05	89	116	27	54
HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 27 aeereeLAkklgLterqVkvWFqNrRak 54 +e++++L +++gL+ +q+ +WF N+R + MCH88888.1 89 EEDKARLVQETGLQLKQINNWFINQRKR 116 578899********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence
CSFKEQLQQH VRVHAMEAVM ACWEIEQSLQ SLTGVSPGEG TGATMSEDED EQVDSDANIF 60 DGSFDGGADN MGFGPLVPTE NERSLMEREE DKARLVQETG LQLKQINNWF INQRKRNWHS 120 NPSTSTVLKS KRKREP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	134	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11060.1	5e-51	TALE family protein