PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89171.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 104aa    MW: 11666.4 Da    PI: 10.4946
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.81.9e-323189259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                 D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp+++++tYegeH+h 
  MCH89171.1 31 ADEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPTMLIVTYEGEHRHA 89
                69************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MRFTRFSGGK NRVKRSVRVP AISSKTADIP ADEYSWRKYG QKPIKGSPYP RGYYKCSTVR  60
GCPARKHVER APDDPTMLIV TYEGEHRHAI QAAMQENAAG IVGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.26e-53WRKY family protein