PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89216.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 120aa    MW: 13445.4 Da    PI: 6.7802
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.81.5e-069461254
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  MCH89216.1  9 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 46
                77888999********998.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MYGMDMQVRK EKLGDRITAL QQLVSPFGKT DTASVLHEAI EYIKFLHDQV NVLSTPYMKN  60
GSPIQHQQGC DNVPKESEGK KQDLRSQGLC LVPISSTFPM ANETPVDFWM PTFGGPLFGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.13e-48bHLH family protein