PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89585.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 270aa    MW: 29723.3 Da    PI: 7.8294
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.69.9e-07249269525
                 CHHHCHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKk 25 
                 +r++r++kNRe+A rsR+RK+
  MCH89585.1 249 RRQKRMIKNRESAARSRARKQ 269
                 79******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGSQGGGDGS GKRSQLHSLV RQNSMYSLTL DEVQNQLGDL GKPLSSMNLD ELLKNVWTVE  60
VNQSTSTDNE GTTQGSQASL QRQASLSLKA ALSMKTVDEV WRDIQQTKDN EEKKSRERQP  120
TLGEMTLEDF LVKAGIVAEA SSDKTNTDTK AGIDSNVAVS QFPPQGQWIQ YPQPQPQYQH  180
LQQSSMGIYM PSQGIAQPLH LGAGASMEIP FADSHMALAA PLMGTVLDTQ ISGRKRSTTE  240
DMVEKTVERR QKRMIKNRES AARSRARKQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-52bZIP family protein