PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89817.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 247aa    MW: 27660.8 Da    PI: 8.4475
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-112321446
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
       MCH89817.1  2 QAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 32
                     79*******.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE QSSAYRRRRL NQSVYRRIED  60
NANFVSRDIA TGMEPVPSPY CINLPNGYNM TTSFPFSSFH GVIDGGVDCG LNGSAHLSGS  120
KEAISSNKQT PSSLFGLFAQ QTPLDFISGG IRNDHYSQMK CWDNQPTGFY HQYPQYMMQM  180
QQQNNNFYSF SSNSTTAATS TTQILGSEVS LSSVAATEDH RDQVLMSNPP PSDTIPFIDF  240
LGVGATT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14550YRRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.17e-28MYB family protein