PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89824.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 223aa    MW: 24952.7 Da    PI: 5.075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.7e-1659109155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++    +Wv+e r+p   +k+++++lg+f tae+Aa+a++ a+++l+g
  MCH89824.1  59 PVYRGVRRRN-LDKWVCEMREP---NKKTKIWLGTFPTAEMAARAHDVAALALRG 109
                 68*****887.9******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MFTSSSSSSS EPSSSSRTIS LPNLEVSHGI SFSNEEVRLA ATTPKKRAGR KKFKETRHPV  60
YRGVRRRNLD KWVCEMREPN KKTKIWLGTF PTAEMAARAH DVAALALRGR NACLNFADSA  120
SRLPIPATKE TKDIQKAAAE AAEAFRPDNI LMTNEIDDTA EASAATEEPF MLSLEEEEEG  180
ELNIPESLRN MALMSPTXSL EHEYEHINED FQDVEVSLWS FSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.19e-43ERF family protein