PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89895.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 196aa    MW: 22662.5 Da    PI: 10.2404
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.66.4e-3327754128
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +ekewyfFs rd+ky+tg r+nrat+sgyWk+tgkd+e++++ ++elvg+kktLvfykgrap+gek++Wvmheyr+
  MCH89895.1   2 GEKEWYFFSMRDRKYPTGVRTNRATNSGYWKTTGKDREIFNSvTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRI 77 
                 579*************************************9989999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MGEKEWYFFS MRDRKYPTGV RTNRATNSGY WKTTGKDREI FNSVTSELVG MKKTLVFYKG  60
RAPRGEKSNW VMHEYRIHSK STFRTNKQEE WVVCRIFKKS GSGKKYPCNS NSNHTRAGLN  120
PYSMQEIGSS NMVQIPQQMM QYYLQGLHGD PSTPHFLYGR NNNNYINGSN TEVLRGGIMQ  180
SHQMNYPSIL PSTTGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-64NAC family protein