PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH89911.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 183aa    MW: 20850.4 Da    PI: 5.2508
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH89911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-162371254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                + kGVr++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l+
  MCH89911.1 23 KLKGVRRRK-WGKWVSEIRVP---G-TqERLWLGTYATPEAAAVAHDIAVYCLK 71
                78****998.**********8...3.35*********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
IYIIYMNWIG SSSTSTSHGN DKKLKGVRRR KWGKWVSEIR VPGTQERLWL GTYATPEAAA  60
VAHDIAVYCL KRPSTLDKLN FPEILSSYCI QQRDHLMSPR SVQKVASDIA MDVDARNIAR  120
ETTMINETTH HMNENDQQVH NVVADDVFWW EGLVGDDDLS LQGVTQVSSQ QQEDLNISIE  180
DYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.12e-39ERF family protein