PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH90072.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 145aa    MW: 17415.7 Da    PI: 8.0648
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH90072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.0001585109123
                 EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                 + C+ C+k ++  ++++ H+++  H
  MCH90072.1  85 FYCELCNKQYKLAMEFEAHLSSydH 109
                 79*****************987666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
IVEPIKSGIR DPRLGVGKQE EDDFFTAEEN VQRKKLDIEL EETEENVRKR EKAAYNIYAC  60
LFTGLVLAER EQKIQTEVKE IRKVFYCELC NKQYKLAMEF EAHLSSYDHN HRKRFKQMKE  120
MHGSSSRDDR QKREQQRQEK ELAKF