PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH90203.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NF-YC

Protein Properties

Length: 138aa MW: 15774.6 Da PI: 6.2467

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH90203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	57.4	3.3e-18	1	48	53	100
NF-YC 53 lfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100 +fi elt+rsw e nkr+tl+ksdia+a++r d+fdflvdivpr++ MCH90203.1 1 MFITELTIRSWDIVEVNKRKTLQKSDIASAISRNDMFDFLVDIVPREN 48 8*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MFITELTIRS WDIVEVNKRK TLQKSDIASA ISRNDMFDFL VDIVPRENTL EHNIFMNIPR 60 RGSAPFANVP YYYVPVPVPM PSQDTAGPSY GPPRMLMGRS LIDQPQFNKQ LHHPLATQVL 120 PIPKQXXXXX XDLPDSDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	5e-21	NF-YC family protein