PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH90625.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 104aa    MW: 11743.6 Da    PI: 9.685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH90625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH543e-172672455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  MCH90625.1 26 VHNLSERRRRDRINEKMKALQELIPRS-----NKSDKASMLDEAIEYLKSLQ 72
                6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
DIDFESAEAK KNVSGSSTKR SRAAEVHNLS ERRRRDRINE KMKALQELIP RSNKSDKASM  60
LDEAIEYLKS LQLQVQMMSM GCGMVPMMFP GIQQYMPTIG MGMG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.11e-39bHLH family protein